Through the end of the 2012-13 season:
| # | School (1st votes) | Rec | Pts | Prev. |
| 1 | Amherst (25) | 30-2 | 625 | 2 |
| 2 | Mary Hardin-Baylor | 27-6 | 589 | -- |
| 3 | North Central (Ill.) | 28-4 | 564 | 3 |
| 4 | St. Thomas | 30-2 | 548 | 1 |
| 5 | Williams | 26-5 | 491 | 8 |
| 6 | Middlebury | 25-4 | 485 | 7 |
| 7 | Calvin | 26-4 | 438 | 12 |
| 8 | St. Mary's (Md.) | 27-4 | 402 | 11 |
| 9 | Illinois Wesleyan | 23-6 | 397 | 10 |
| 10 | UW-Whitewater | 24-5 | 388 | 5 |
| 11 | Whitworth | 26-4 | 378 | 6 |
| 12 | Catholic | 25-4 | 373 | 9 |
| 13 | Cabrini | 25-6 | 307 | -- |
| 14 | Wooster | 24-6 | 259 | 20 |
| 15 | UW-Stevens Point | 22-6 | 234 | 14 |
| 16 | Virginia Wesleyan | 23-8 | 205 | 25 |
| 17 | Randolph-Macon | 21-10 | 194 | -- |
| 18 | WPI | 26-3 | 153 | 4 |
| 19 | Ithaca | 21-9 | 144 | -- |
| 20 | Morrisville State | 23-6 | 140 | -- |
| 21 | Rhode Island College | 26-4 | 133 | 13 |
| 22 | Washington U. | 21-6 | 131 | 17 |
| 23 | Rochester | 22-5 | 100 | 18 |
| 24 | Wheaton (Ill.) | 21-7 | 91 | 22 |
| 25 | Ohio Wesleyan | 23-6 | 90 | 21 |
Dropped out: No. 15 Ramapo, No. 16 Hampden-Sydney; No. 19 Rose-Hulman; No. 23 Cortland State; No. 24 MIT.
Others receiving votes: Hampden-Sydney 49; Cortland St. 49; Rose-Hulman 24; Concordia (Texas) 24; Christopher Newport 22; Ramapo 19; Alvernia 14; Dickinson 8; Emory 7; Transylvania 7; MIT 4; Staten Island 2; Augustana 2; St. Norbert 2; Wesley 2; Hobart 2; Delaware Valley 1.
The D3hoops.com Top 25 is voted on by a panel of 25 coaches, Sports Information Directors and media members from across the country, and is published weekly.